基于LAMP技术的等温PCR仪校准试剂研究

    Research on Calibration Reagents for Isothermal PCR Analyzers Based on Loop-mediated Isothermal Amplification (LAMP) Technology

    • 摘要: 针对市场上对等温聚合酶链式反应分析仪(PCR仪)校准的迫切需求,研发基于环介导等温扩增(LAMP)技术的等温PCR仪校准试剂和标准体系,以荧光定量PCR仪校准用标准物质(GBW(E)091100-091108)特异性量值和特异性序列为标准,设计LAMP基础引物(F3、B3、FIP、BIP)和环引物(LF、LB),优化筛选最佳基础引物和环引物,确定最佳反应温度,考察试剂盒对应标准物质浓度梯度范围、灵敏度和重复性等,并在市售等温PCR仪上进行校准试剂性能验证。结果显示,LAMP校准试剂盒的最佳反应温度为65℃,标准物质范围覆盖7个数量级(100~106 copies/μL),灵敏度可达100 copies/μL,重复性好。建立的基于LAMP技术的等温PCR仪校准试剂适用于等温PCR仪的计量校准测试,支撑等温PCR仪的性能评价及市场监管,为国家等温PCR仪相关计量校准规范的制定和实施奠定基础。

       

      Abstract: To address the growing demand for accurate calibration of isothermal polymerase chain reaction (PCR) analyzers in the market, this study developed calibration reagents and a standard system for isothermal PCR analyzers based on loop-mediated isothermal amplification (LAMP) technology. Using the specific values and characteristic sequences from fluorescence quantitative PCR instrument standard materials (GBW(E)091100-091108) as the reference, LAMP regular primers (F3, B3, FIP, BIP) and loop primers (LF, LB) were designed. The optimal regular and loop primers, along with the ideal reaction temperature, were identified through screening tests. The performance of the calibration kit was assessed by evaluating the concentration gradient range of the corresponding standard materials, as well as the kit's sensitivity and reproducibility. Calibration reagent performance was further validated using commercially available isothermal PCR analyzers. Results indicated that the optimal reaction temperature for the LAMP calibration kit is 65℃, with the standard material concentration range covering seven orders of magnitude (100 to 106 copies/μL) and a sensitivity threshold of 100 copies/μL. The kit also demonstrated excellent repeatability. The developed LAMP-based calibration reagents are suitable for the calibration of isothermal PCR analyzers, supporting their performance evaluation and market regulation. This research lays a solid foundation for the development and implementation of national calibration and verification standards for isothermal PCR analyzers.

       

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